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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17659266_17660477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17659266 - 17660477

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGG

5'SS Class:

strong_major

3'SS Sequence:

AAACCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

AGTTTATAAACC

Flanking Amino Acid:

LRWFTPWSKARHVEEYFLPR

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

69.7

43.7

Major BPS

78.6

0.71

78.6

Major PPT

0.22

55.6

40.1

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

52.1

0.05

1.9

66.42

38.8

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368

ENSAPLT00000020060

17643781 - 17663646

19866