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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17660568_17660981_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17660568 - 17660981

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATGTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATT

Flanking Amino Acid:

RYNCRVIFLNKKILLIRPKI

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.6

0.58

1.1

79.3

38.2

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

74.3

0.84

1.2

86.64

33.8

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020060

17643781 - 17663646

19866

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368