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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17662684_17662802_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17662684 - 17662802

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGCCTT

5'SS Class:

major

3'SS Sequence:

CTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

TGCTGCTTGAGC

Flanking Amino Acid:

FEGNAGRILKSIEIAKGKGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

71.6

40.2

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

91.3

0.93

0.6

84.1

30.8

Minor 5ss

40.1

-1.1

3.3

56.8

41.8

Minor BPS

49.2

-0

2.1

62.11

43.9

Associated Gene:

Gene:

NADSYN1

Ensembl Gene ID:

ENSAPLG00000003062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020060

17643781 - 17663646

19866

ENSAPLT00000019982

17645374 - 17662887

17514

ENSAPLT00000003162

17644520 - 17662887

18368