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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17673009_17679243_R

Intron Information:

Intron Rank:

142463

Intron Class:

major

Intron Phase:

Intron Coordinates:

17673009 - 17679243

Intron Length:

6235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TACTACTGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.3

68.8

42.3

Major BPS

79.5

0.73

0.9

36.9

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

37.8

-1.4

3.1

49.2

47.1

Minor BPS

48.3

-0

1.9

67.11

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033110

17672282 - 17680096

7815