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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17698832_17702619_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17698832 - 17702619

Intron Length:

3788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTATTTATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CCTTTCTTATTG

Flanking Amino Acid:

ISHYAGQDATDAFVAFHSDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.8

39.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.2

0.5

70.6

44.1

Minor 5ss

40.1

-1.1

3.2

57.3

46.8

Minor BPS

55.6

0.04

1.7

57.89

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025890

17698613 - 17706598

7986

ENSAPLT00000002434

17698456 - 17704763

6308