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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17703390_17704312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17703390 - 17704312

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAC

5'SS Class:

strong_major

3'SS Sequence:

TATTGTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

CTCTGGTTATCC

Flanking Amino Acid:

VGMAFFTTAQIQMGWFQHDL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.4

36.7

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

78.7

0.64

0.9

70.4

40.9

Minor 5ss

31.6

-2.1

3.2

41.7

Minor BPS

43.2

-0.5

2.5

57.19

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025890

17698613 - 17706598

7986