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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17745673_17747329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17745673 - 17747329

Intron Length:

1657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

GAATGTGTAACA

Flanking Amino Acid:

DQPSIEPTKNKMLVKDFREL

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

74.4

0.55

0.9

68.4

37.4

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

45.7

-0.3

2.3

57.87

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001252

17741803 - 17754181

12379