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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17748670_17750034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17748670 - 17750034

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTATTTTCACA

Flanking Amino Acid:

FTLGKKFSVELGIKKKKYMP

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.9

0.85

0.7

83.6

31.3

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

60.4

0.32

1.8

75.15

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001252

17741803 - 17754181

12379