Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_17751397_17751992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17751397 - 17751992

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATCT

5'SS Class:

major

3'SS Sequence:

TCTGGTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTTACTGAATT

Flanking Amino Acid:

KSLLAYYFIFRMLESSWFVW

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.8

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

74.1

0.54

68.6

42.1

Minor 5ss

46.1

-0.4

2.9

66.5

44.4

Minor BPS

66.4

0.59

1.6

83.16

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001252

17741803 - 17754181

12379