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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17782918_17784057_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17782918 - 17784057

Intron Length:

1140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTAAA

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTGGTATGAAAA

Flanking Amino Acid:

SWKKKFIRFKNGIITGVYPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

76.2

34.5

Major BPS

68.1

0.45

58.1

38.5

Major PPT

91.7

0.94

0.6

84.4

30.5

Minor 5ss

-1.8

2.9

42.5

44.3

Minor BPS

45.8

-0.3

1.8

58.27

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788

ENSAPLT00000016712

17771593 - 17806802

35210