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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17784198_17784592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17784198 - 17784592

Intron Length:

395

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTCTTAAAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTTTCTTAAAA

Flanking Amino Acid:

IAKINRTLDTTGYMSNQTQN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

82.2

0.8

71.9

35.8

Major PPT

70.1

0.45

67.8

36.7

Minor 5ss

37.5

-1.4

2.7

45.1

35.9

Minor BPS

82.2

1.01

1.2

88.42

27.9

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788

ENSAPLT00000016712

17771593 - 17806802

35210