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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17789052_17789909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17789052 - 17789909

Intron Length:

858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TCTTACTCATTT

Flanking Amino Acid:

KLKSWWATNYVSDWWEEYIY

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

75.5

0.57

0.9

68.9

37.1

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

49.9

0.08

73.08

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788

ENSAPLT00000016712

17771593 - 17806802

35210