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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17789988_17790635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17789988 - 17790635

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGATAATTAACT

Flanking Amino Acid:

IMVNSNYFAMDFLYLTPTTL

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.5

0.75

0.8

77.1

36.6

Minor 5ss

33.8

-1.8

38.1

42.1

Minor BPS

63.1

0.49

1.8

80.66

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788

ENSAPLT00000016712

17771593 - 17806802

35210