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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17790744_17792130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17790744 - 17792130

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTATA

5'SS Class:

major

3'SS Sequence:

ATTTGTGGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TACAATTTAATG

Flanking Amino Acid:

KKLDRQEIKPILLMGSTVPL

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

73.8

36.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

71.6

0.49

1.1

65.7

44.8

Minor 5ss

47.6

-0.2

2.5

40.2

Minor BPS

51.2

-0.1

1.6

41.3

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788

ENSAPLT00000016712

17771593 - 17806802

35210