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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17796052_17797819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17796052 - 17797819

Intron Length:

1768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTTACATTTACA

Flanking Amino Acid:

DAPIVGHLWENVMATEYLEL

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

83.2

0.75

0.9

77.2

36.9

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

54.7

0.14

70.78

40.4

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788

ENSAPLT00000016712

17771593 - 17806802

35210