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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17798873_17800092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17798873 - 17800092

Intron Length:

1220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTCAAATTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATTTTTCAAAT

Flanking Amino Acid:

QLALQLAHYRDMGKFSLTYE

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

74.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

65.2

0.34

1.1

64.4

40.4

Minor 5ss

33.3

-1.9

2.8

33.8

41.1

Minor BPS

0.42

1.6

78.4

37.6

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033643

17771593 - 17807380

35788