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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17802824_17803811_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17802824 - 17803811

Intron Length:

988

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTAACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TTGTACTTGATT

Flanking Amino Acid:

LSVDSPFLKEVLSEPWRLST

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

0.62

65.3

41.5

Major PPT

59.8

0.22

1.1

60.9

38.4

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

0.71

1.5

83.92

37.2

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016712

17771593 - 17806802

35210

ENSAPLT00000033643

17771593 - 17807380

35788