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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17803917_17805206_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17803917 - 17805206

Intron Length:

1290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTTTG

5'SS Class:

weak_major

3'SS Sequence:

TTTCTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

GGAAAAAAAATA

Flanking Amino Acid:

MLSSGGGFGPVADDGYGVSY

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

65.5

Major BPS

0.1

59.7

32.6

Major PPT

89.2

0.88

0.6

89.2

19.7

Minor 5ss

57.4

0.25

2.3

71.9

Minor BPS

34.2

-1.2

1.9

38.34

32.5

Associated Gene:

Gene:

CPT1A

Ensembl Gene ID:

ENSAPLG00000015970

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016712

17771593 - 17806802

35210

ENSAPLT00000033643

17771593 - 17807380

35788