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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17892772_17893955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17892772 - 17893955

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGCTTTTTAATT

Flanking Amino Acid:

ASFSEFTSSLSSKDSLRSNS

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

1.1

76.1

37.2

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

67.6

0.63

1.2

74.04

37.5

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017318

17890421 - 17925684

35264

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000026396

17886357 - 17925684

39328

ENSAPLT00000041346

17890421 - 17925684

35264

ENSAPLT00000021209

17884476 - 17925684

41209

ENSAPLT00000036920

17886357 - 17925684

39328

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000027982

17886357 - 17925111

38755