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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17895631_17896731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17895631 - 17896731

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TCTCTTTGTATT

Flanking Amino Acid:

AFTPESQRRSSSGSTDSEES

Intron Amino Acid Position:

645

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

72.7

0.57

72.1

31.1

Major PPT

76.3

0.59

1.1

80.1

36.7

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

46.9

-0.1

1.7

65.05

40.4

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021209

17884476 - 17925684

41209

ENSAPLT00000036920

17886357 - 17925684

39328

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000027982

17886357 - 17925111

38755

ENSAPLT00000017318

17890421 - 17925684

35264

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000026396

17886357 - 17925684

39328

ENSAPLT00000041346

17890421 - 17925684

35264