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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17899741_17903018_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17899741 - 17903018

Intron Length:

3278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGGGGTTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

GAATCATTATAT

Flanking Amino Acid:

GFSQDSSLQQAFSDYQMQQM

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

70.4

0.51

67.1

39.4

Major PPT

58.4

0.19

1.2

49.5

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

48.4

-0

1.9

66.15

43.2

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017318

17890421 - 17925684

35264

ENSAPLT00000027982

17886357 - 17925111

38755

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000021209

17884476 - 17925684

41209

ENSAPLT00000041346

17890421 - 17925684

35264

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000036920

17886357 - 17925684

39328