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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1790158_1791682_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1790158 - 1791682

Intron Length:

1525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

GTGTCCTCAATT

Flanking Amino Acid:

FSLELEREKMVRQKMEEQVA

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

0.5

0.9

61.4

35.9

Major PPT

74.6

0.55

69.8

41.4

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

69.8

0.7

1.5

81.18

40.6

Associated Gene:

Gene:

SWAP70

Ensembl Gene ID:

ENSAPLG00000003053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003150

1786214 - 1820797

34584