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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17911203_17911887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17911203 - 17911887

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGGATATTAATA

Flanking Amino Acid:

LLTLLETRRQTFEGHIEICP

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.3

76.2

39.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

37.7

-1.4

3.3

48.5

41.2

Minor BPS

52.9

0.09

1.6

61.67

38.5

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021209

17884476 - 17925684

41209

ENSAPLT00000036920

17886357 - 17925684

39328

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000027982

17886357 - 17925111

38755

ENSAPLT00000017318

17890421 - 17925684

35264

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000026396

17886357 - 17925684

39328

ENSAPLT00000041346

17890421 - 17925684

35264