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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17914727_17916175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17914727 - 17916175

Intron Length:

1449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACACAT

U12 Branch Point Sequence:

ATATGTACACTT

Flanking Amino Acid:

PQDMDEKIRYKYPNISCELL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.9

Major BPS

57.6

0.19

64.6

32.2

Major PPT

82.8

0.74

0.7

76.2

32.4

Minor 5ss

37.8

-1.4

51.4

38.8

Minor BPS

38.2

-0.8

2.1

56.01

40.7

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000027982

17886357 - 17925111

38755

ENSAPLT00000017318

17890421 - 17925684

35264

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000026396

17886357 - 17925684

39328

ENSAPLT00000041346

17890421 - 17925684

35264

ENSAPLT00000021209

17884476 - 17925684

41209

ENSAPLT00000036920

17886357 - 17925684

39328