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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17916409_17920438_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17916409 - 17920438

Intron Length:

4030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTATGCCTC

5'SS Class:

weak_major

3'SS Sequence:

TCTTCTTATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTCTTATCC

Flanking Amino Acid:

MFAVTSMFWKFDLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.1

55.2

42.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.76

0.8

77.2

36.1

Minor 5ss

51.4

0.05

2.7

69.7

35.8

Minor BPS

69.8

0.6

1.6

77.51

38.8

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000027982

17886357 - 17925111

38755

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000026396

17886357 - 17925684

39328

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000041346

17890421 - 17925684

35264