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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17916409_17923728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17916409 - 17923728

Intron Length:

7320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTCTTATCC

Flanking Amino Acid:

MMTSMFWKFDLH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

74.8

35.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.76

0.8

77.2

36.1

Minor 5ss

39.5

-1.2

3.3

53.8

44.4

Minor BPS

69.8

0.6

1.6

77.51

38.8

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021209

17884476 - 17925684

41209