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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17920567_17925001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

17920567 - 17925001

Intron Length:

4435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAATG

5'SS Class:

strong_major

3'SS Sequence:

CCTTATTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTCCTTATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

66.2

0.36

66.5

33.1

Minor 5ss

43.2

-0.7

2.9

57.1

47.2

Minor BPS

78.4

0.87

1.5

86.27

31.8

Associated Gene:

Gene:

PPP6R3

Ensembl Gene ID:

ENSAPLG00000015481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018769

17889075 - 17925684

36610

ENSAPLT00000016208

17884018 - 17925684

41667

ENSAPLT00000026871

17888467 - 17925684

37218

ENSAPLT00000026396

17886357 - 17925684

39328