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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17998899_17999358_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17998899 - 17999358

Intron Length:

460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTTCTCCTGACA

Flanking Amino Acid:

GYELNDFVSEGKLLDAYKYA

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

77.9

0.69

78.3

31.3

Major PPT

79.8

0.67

0.9

72.6

36.3

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

61.7

0.36

1.7

76.64

33.5

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055