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Intron Name: Anas_platyrhynchos_platyrhynchos_5_17999469_18000728_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17999469 - 18000728

Intron Length:

1260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGAAAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

PIPAIPHKKYAMICSQLLNL

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.3

71.6

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.7

89.7

25.7

Minor 5ss

34.2

-1.8

2.9

39.8

39.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055