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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18000943_18003089_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18000943 - 18003089

Intron Length:

2147

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCAGATATT

5'SS Class:

weak_major

3'SS Sequence:

TTGGTTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

GAAGCCTTAACA

Flanking Amino Acid:

NWRTENFCCKSVGKCSANQI

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.1

0.03

1.4

70.6

39.2

Major BPS

0.5

39.8

Major PPT

78.6

0.64

72.9

42.2

Minor 5ss

31.3

-2.1

4.3

50.5

46.1

Minor BPS

0.62

1.4

70.64

40.9

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055