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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18006035_18006341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18006035 - 18006341

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATATTCTTATCC

Flanking Amino Acid:

DELKRLPYRSGDITIFRQSS

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.2

0.68

0.8

77.8

30.8

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

66.4

0.49

1.6

73.35

37.3

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055