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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18008882_18009522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18008882 - 18009522

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGGGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTCTCAGTAACA

Flanking Amino Acid:

TVVNPIPFYKRCVYQACNYE

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

0.52

1.5

79.6

35.6

Major PPT

73.8

0.54

1.1

69.2

46.1

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

57.4

0.23

2.3

76.36

40.9

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055