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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18009656_18010561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18009656 - 18010561

Intron Length:

906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCCTGTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TGAAGTGTAACA

Flanking Amino Acid:

ENWRESMDNCTIPCTGNQTF

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

58.9

0.22

49.8

35.1

Major PPT

80.4

0.68

0.8

75.5

33.1

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

44.2

-0.4

2.3

57.4

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055