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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18014149_18014749_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18014149 - 18014749

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACCTGG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATGTATT

Flanking Amino Acid:

DGNCEYILAMDGCSVNRPHS

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

53.3

46.3

Major BPS

0.62

1.4

85.7

34.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

48.9

-0.1

2.6

61.8

44.9

Minor BPS

47.5

-0.1

2.1

73.93

42.7

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055