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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18016324_18016762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18016324 - 18016762

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCAG

5'SS Class:

major

3'SS Sequence:

TTATTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

FFIKISRETQETICGLCGNY

Intron Amino Acid Position:

995

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

43.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.79

0.9

81.5

34.9

Minor 5ss

36.3

-1.6

3.2

46.8

48.6

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055