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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18017003_18017086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18017003 - 18017086

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCGATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

CATGACTTAATT

Flanking Amino Acid:

SQVFSACHNKVNRMPYYEAC

Intron Amino Acid Position:

1075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.65

0.9

35.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

61.4

0.44

1.7

73.87

43.2

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055