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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18017244_18017990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18017244 - 18017990

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTGTCCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

AAATTCTGACTT

Flanking Amino Acid:

CIDWRTPEFCPVYCEYYNSH

Intron Amino Acid Position:

1127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

73.5

38.6

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

82.8

0.74

0.8

81.5

30.4

Minor 5ss

46.6

-0.3

2.8

66.2

38.1

Minor BPS

49.3

0.02

1.7

65.03

39.4

Associated Gene:

Gene:

MUC6

Ensembl Gene ID:

ENSAPLG00000015143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015803

17995819 - 18018873

23055