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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18058526_18060229_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18058526 - 18060229

Intron Length:

1704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTATG

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGAACTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAA

U12 Branch Point Sequence:

GCTGCCTGAACT

Flanking Amino Acid:

LAPGSDDNFASPDLASSEVV

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.7

34.8

Major BPS

51.8

0.05

1.2

45.3

39.8

Major PPT

54.4

0.1

47.8

39.5

Minor 5ss

39.4

-1.2

2.8

51.2

45.3

Minor BPS

65.5

0.56

1.6

77.65

44.4

Associated Gene:

Gene:

AP2A2

Ensembl Gene ID:

ENSAPLG00000016325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037042

18052720 - 18101201

48482

ENSAPLT00000030543

18052720 - 18101201

48482