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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18062408_18063489_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18062408 - 18063489

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCATGTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

GTAAATACAACT

Flanking Amino Acid:

LSTIASTDILATVLEEMPPF

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

56.3

0.14

1.1

59.2

34.9

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

43.4

-0.4

1.9

61.32

41.5

Associated Gene:

Gene:

AP2A2

Ensembl Gene ID:

ENSAPLG00000016325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037042

18052720 - 18101201

48482

ENSAPLT00000030543

18052720 - 18101201

48482

ENSAPLT00000017061

18052720 - 18101201

48482