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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18113398_18115212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18113398 - 18115212

Intron Length:

1815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTGTTGTCAATT

Flanking Amino Acid:

LSKNMVLLAKNENFDGFVVE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

50.7

0.1

2.2

75.27

42.3

Associated Gene:

Gene:

CHID1

Ensembl Gene ID:

ENSAPLG00000003133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003208

18109010 - 18203944

94935