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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18124155_18147995_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18124155 - 18147995

Intron Length:

23841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTGTTTTAAAA

Flanking Amino Acid:

ILVIPPAVAAGTNQPGMFTK

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.6

0.51

1.1

75.7

37.3

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

66.3

0.51

1.5

75.65

35.9

Associated Gene:

Gene:

CHID1

Ensembl Gene ID:

ENSAPLG00000003133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003208

18109010 - 18203944

94935