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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18150222_18198758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18150222 - 18198758

Intron Length:

48537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATT

Flanking Amino Acid:

GALGEPILGGRYIETLKEHK

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.1

0.74

0.8

78.3

34.8

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

73.6

0.82

1.1

81.25

Associated Gene:

Gene:

CHID1

Ensembl Gene ID:

ENSAPLG00000003133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003208

18109010 - 18203944

94935