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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18239240_18272613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18239240 - 18272613

Intron Length:

33374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

AAAGTTTGAGTT

Flanking Amino Acid:

VILFFVYTDKIDKYAQRDLK

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.8

77.9

38.6

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

33.6

-1.9

2.9

40.4

45.7

Minor BPS

-0.4

1.6

52.6

36.4

Associated Gene:

Gene:

TSPAN4

Ensembl Gene ID:

ENSAPLG00000003602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037712

18225875 - 18409115

183241

ENSAPLT00000031480

18225875 - 18557755

331881

ENSAPLT00000003710

18225875 - 18446427

220553

ENSAPLT00000039716

18225875 - 18454256

228382