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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18408124_18454106_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18408124 - 18454106

Intron Length:

45983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTGTCTTTTACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.4

20.6

Major BPS

74.2

0.6

39.4

Major PPT

80.9

0.69

0.8

74.3

35.9

Minor 5ss

34.8

-1.7

2.8

44.9

43.2

Minor BPS

70.3

0.62

1.6

78.32

37.8

Associated Gene:

Gene:

TSPAN4

Ensembl Gene ID:

ENSAPLG00000003602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031480

18225875 - 18557755

331881