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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1860086_1861644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1860086 - 1861644

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTTTTTTTACTT

Flanking Amino Acid:

ALISQDGTQHVNISQADMQA

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

83.1

0.74

0.9

80.3

37.3

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

63.2

0.49

1.6

78.3

39.3

Associated Gene:

Gene:

ZNF143

Ensembl Gene ID:

ENSAPLG00000002385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002442

1855696 - 1879635

23940