Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_18680322_18680559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18680322 - 18680559

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGTGAC

5'SS Class:

major

3'SS Sequence:

GCCTCCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

GCCTCCCTGACA

Flanking Amino Acid:

RFWAELNATIGIDYQVKSLM

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

67.3

38.6

Major BPS

84.6

0.86

41.2

Major PPT

66.1

0.36

60.5

35.4

Minor 5ss

32.4

-2

3.4

43.5

44.3

Minor BPS

56.9

0.21

1.7

63.99

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014099

18675554 - 18698720

23167