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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18680702_18680836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18680702 - 18680836

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CTTTTCAAAAGC

Flanking Amino Acid:

RGQPVGTETRLQVLEPASCS

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.8

43.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

81.6

0.71

0.8

32.4

Minor 5ss

31.9

-2.1

2.9

41.8

Minor BPS

46.1

-0.3

2.2

62.12

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014099

18675554 - 18698720

23167