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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18687220_18687896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18687220 - 18687896

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTCTTTTAAAT

Flanking Amino Acid:

EAQLEQEQKDRDVFRVSKNM

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.8

0.4

0.9

60.1

35.4

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

65.7

0.57

1.4

77.95

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014099

18675554 - 18698720

23167