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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18691715_18691845_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18691715 - 18691845

Intron Length:
131

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCTCGT

5'SS Class:
major

3'SS Sequence:
TTTACCTCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTTAC

U12 Branch Point Sequence:
GTGTCTTTACCT

Flanking Amino Acid:
KAERERIICQEALRHDRSNL

Intron Amino Acid Position:
245

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.2
63.8
47.8

Major BPS
74
0.6
1
65.6
41.1

Major PPT
83.6
0.76
0.8
77.7
30.8

Minor 5ss
40.4
-1.1
3.2
59.7
44.7

Minor BPS
67.3
0.62
1.6
80.25
42

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18675554 - 18698720
23167