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Intron Name: Anas_platyrhynchos_platyrhynchos_5_18724043_18724895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18724043 - 18724895

Intron Length:

853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TCATCCTTATGA

Flanking Amino Acid:

RDALHFLKKNGLLNRPSPAR

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

65.7

Major BPS

84.6

0.86

41.2

Major PPT

85.4

0.8

0.7

Minor 5ss

31.2

-2.2

3.3

38.7

40.9

Minor BPS

57.6

0.23

1.9

67.86

44.5

Associated Gene:

Gene:

PNPLA2

Ensembl Gene ID:

ENSAPLG00000013222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013794

18720009 - 18738172

18164